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AUSTRALIAN MUSEUM:
I made a special trip to the Australian Museum (Sydney) in October 2002,
and was given a behind- the-scenes tour by Dr. Karen Firestone of the Evolutionary
Biology Unit. One of the highlights of my visit was seeing the laboratory
where the museum had been working on a new project to retrieve and replicate
DNA from preserved thylacine tissue which has been stored at the museum
for well over a century. It is hoped that if the thylacine's complete
genome can be obtained through this method, it can eventually be introduced
into a host cell from a closely related species such as the Tasmanian Devil
(Sarcophilus
harrisii), hopefully allowing it to develop into a viable thylacine
embryo. If successful, thylacines could then be cloned from various
tissue samples to create a series of genetically distinct individuals.
These would form a nucleus population which could possibly be used to repopulate
the species into protected areas of its former habitat. Though this
ambitious project still faces a number of significant obstacles before
the goal of actual thylacine cloning can be realized, the field of genetic
engineering is now developing at a very rapid pace, and there is really
no way of knowing how much further such a project may progress with the
passage of perhaps just 10-15 more years.
Since the time that the following travelogue was written, there have been
some new developments in the thylacine cloning project. To read a
detailed account of the project's history and its current status, please
see the pages regarding The
Thylacine Cloning Project in the Additional Thylacine Topics
section at my Thylacine Museum website.
The Genetics Lab:
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Within this vial is a small piece of kidney tissue taken from the museum's
infant female thylacine specimen which was preserved in alcohol in 1866.
Maintaining a sterile environment is an absolutely crucial factor in this
type of work. To prevent contamination by outside particles, disposable
latex gloves must be worn when handling any containers of genetic material. |
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These vials contain a set of thylacine DNA extractions from different tissue
types. To better the chances of obtaining high quality gene sequences,
samples of tissue were taken from various parts of the preserved thylacine's
body. Cells from deep inside the body are preferable to this purpose,
as there is less of a possibility that they have been contaminated with
genetic material from the outside world (e.g. from bacteria, fungi, etc.). |
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This is an agar plate of quoll (Dasyurus)
DNA (the protamine P1 left domain) cloned into a plasmid
and grown up within Escherichia coli bacterial colonies. The
DNA used is obtained via PCR (Polymerase
Chain Reaction). This is a process for
rapidly amplifying a single DNA molecule into many billions of molecules. |
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A gene (cytochrome B) extracted from a thylacine tooth is here being grown
within E. coli bacteria using the same process as with the quoll
DNA in the previous photo. The purpose of this is to eventually create
a genetic library of the thylacine's entire genome, stored within the bacteria. |
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This is the box of genetic tools that Dr. Firestone uses for cloning thylacine
DNA. To preserve the DNA extracts inside, the box is kept within
the lab's ultra-cold (-80° C) freezer. This freezer is so cold
that it will actually "burn" skin to the touch. Frostbite can easily
result without the use of protective gloves. |
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Some containers of genetic materials for various other projects stored
in the ultra-cold freezer. This unit generates an environment that
is far colder than a standard household freezer. Extremely cold temperatures
are necessary in order to preserve the structure of DNA. Under warmer
conditions, this protein rapidly decomposes. |
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This is an Applied Biosystems 310 automated DNA sequencer - a complex,
laser-equipped device that is able to perform a variety of applications
such as comparative sequencing, linkage analysis, SNP discovery and validation,
and mutation detection. |
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